Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11110 and 11111 are separated by 214 nucleotides
11111 and 11112 are separated by 431 nucleotides
11112 and 11113 are separated by 949 nucleotides
11113 and 11114 are separated by 236 nucleotides
mRNA_2742: 11110 - K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, at 117,665 to 118,794
11110
mRNA_2743: 11111 - KOG4491 Predicted membrane protein, at 119,009 to 120,330
11111
mRNA_2744: 11112 - K20798 HENMT1 small RNA 2'-O-methyltransferase, at 120,762 to 122,799
11112
mRNA_2745: 11113 - HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785, at 123,749 to 127,463
11113
mRNA_2746: 11114 - K00859 coaE dephospho-CoA kinase, at 127,700 to 128,562
11114
Group
Condition
mRNA
_2742
mRNA
_2743
mRNA
_2744
mRNA
_2745
mRNA
_2746
11110
11111
11112
11113
11114
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.2
+0.1
-0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.3
-0.3
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
-0.2
-0.3
-0.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.1
-0.2
-0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.2
-0.2
-0.2
N.D.
auxotrophy
YNB Glucose
+0.4
-0.3
-0.4
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.2
+0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
+0.1
-0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.1
-0.3
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.1
-0.3
-0.2
N.D.
growth on ypd
YPD
+0.0
-0.0
-0.1
-0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.1
-0.0
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.2
-0.1
-0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.3
+0.0
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
+0.2
-0.1
N.D.
growth on oleic acid
YNB Glucose
+0.2
-0.2
-0.1
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.1
+0.3
+0.0
N.D.
auxotrophy
Dropout Complete
+0.3
+0.1
-0.2
-0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.0
+0.0
+0.1
+0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.6
+0.0
-0.0
-0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.1
+0.6
+0.1
N.D.
remove
mRNA_2742
plot
remove
mRNA_2743
plot
remove
mRNA_2744
remove
mRNA_2745
plot
remove
mRNA_2746
plot