Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11119 and 11120 are separated by 500 nucleotides
11120 and 11121 are separated by 437 nucleotides
11121 and 11122 are separated by 131 nucleotides
11122 and 11123 are separated by 268 nucleotides
mRNA_2751: 11119 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 136,255 to 137,508
11119
mRNA_2752: 11120 - HMMPfam-F-box-like-PF12937, at 138,009 to 139,329
11120
mRNA_2753: 11121 - HMMPfam-F-box-like-PF12937, at 139,767 to 141,011
11121
mRNA_2754: 11122 - SUPERFAMILY--SSF50249, at 141,143 to 143,248
11122
mRNA_2755: 11123 - K20247 EGT2 hercynylcysteine sulfoxide lyase, at 143,517 to 145,999
11123
Group
Condition
mRNA
_2751
mRNA
_2752
mRNA
_2753
mRNA
_2754
mRNA
_2755
11119
11120
11121
11122
11123
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
+0.1
-0.3
-0.3
-0.1
growth on ricinoleic acid
YNB Glucose
-0.4
-0.1
-0.3
-0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
-0.1
-0.2
-0.2
growth on ypd
YPD
-0.1
+0.1
-0.1
-0.4
-0.1
auxotrophy
Dropout Complete
-0.1
-0.0
-0.1
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
+0.2
-0.1
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.2
-0.1
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.0
-0.2
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.1
-0.1
-0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.2
-0.2
+0.2
-0.2
auxotrophy
YNB Glucose
-0.2
+0.1
-0.2
+0.1
-0.1
growth on oleic acid
YNB Glucose
-0.1
+0.2
-0.3
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.3
-0.4
+0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
-0.0
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
-0.1
+0.0
-0.0
growth on oleic acid
YNB Oleic Acid
+0.0
-0.0
+0.0
+0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.1
-0.3
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.4
+0.0
-0.0
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
-0.1
+0.2
-0.4
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.4
+0.0
+0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.7
+0.3
+0.0
-0.0
-0.1
remove
mRNA_2751
plot
remove
mRNA_2752
plot
remove
mRNA_2753
remove
mRNA_2754
plot
remove
mRNA_2755
plot