Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11121 and 11122 are separated by 131 nucleotides11122 and 11123 are separated by 268 nucleotides11123 and 11124 are separated by 345 nucleotides11124 and 11125 are separated by 1223 nucleotides mRNA_2753: 11121 - HMMPfam-F-box-like-PF12937, at 139,767 to 141,011 11121 mRNA_2754: 11122 - SUPERFAMILY--SSF50249, at 141,143 to 143,248 11122 mRNA_2755: 11123 - K20247 EGT2 hercynylcysteine sulfoxide lyase, at 143,517 to 145,999 11123 mRNA_2756: 11124 - KOG2450 Aldehyde dehydrogenase, at 146,345 to 148,269 11124 mRNA_2757: 11125 - Hypothetical Protein, at 149,493 to 150,603 11125
Group Condition mRNA_2753 mRNA_2754 mRNA_2755 mRNA_2756 mRNA_2757
11121 11122 11123 11124 11125
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.3 -0.1 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.0 -0.1 -0.1 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1 +0.1 +0.2 -0.9
growth on ricinoleic acid YNB Glucose -0.3 -0.1 +0.0 +0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.1 +0.2 +0.2 -1.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.2 +0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.1 +0.1 -0.1 -0.3
auxotrophy Dropout Complete -0.1 +0.1 -0.3 -0.2 -0.1
growth on ypd YPD -0.1 -0.4 -0.1 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 -0.2 -0.1 -0.3
auxotrophy YNB Glucose -0.2 +0.1 -0.1 -0.1 -0.2
growth on oleic acid YNB Glucose -0.3 +0.1 +0.0 -0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 -0.0 -0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.0 +0.2 -0.1 +0.0 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.4 +0.2 -0.4 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.0 -0.1 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 -0.0 -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.2 -0.2 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.2 -0.1 -0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 +0.1 -0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.0 -0.1 +0.0 +0.9
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