Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11121 and 11122 are separated by 131 nucleotides
11122 and 11123 are separated by 268 nucleotides
11123 and 11124 are separated by 345 nucleotides
11124 and 11125 are separated by 1223 nucleotides
mRNA_2753: 11121 - HMMPfam-F-box-like-PF12937, at 139,767 to 141,011
11121
mRNA_2754: 11122 - SUPERFAMILY--SSF50249, at 141,143 to 143,248
11122
mRNA_2755: 11123 - K20247 EGT2 hercynylcysteine sulfoxide lyase, at 143,517 to 145,999
11123
mRNA_2756: 11124 - KOG2450 Aldehyde dehydrogenase, at 146,345 to 148,269
11124
mRNA_2757: 11125 - Hypothetical Protein, at 149,493 to 150,603
11125
Group
Condition
mRNA
_2753
mRNA
_2754
mRNA
_2755
mRNA
_2756
mRNA
_2757
11121
11122
11123
11124
11125
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.3
-0.1
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.0
-0.1
-0.1
-0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.1
+0.1
+0.2
-0.9
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
+0.0
+0.1
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.1
+0.2
+0.2
-1.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
-0.2
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.1
+0.1
-0.1
-0.3
auxotrophy
Dropout Complete
-0.1
+0.1
-0.3
-0.2
-0.1
growth on ypd
YPD
-0.1
-0.4
-0.1
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.2
-0.2
-0.1
-0.3
auxotrophy
YNB Glucose
-0.2
+0.1
-0.1
-0.1
-0.2
growth on oleic acid
YNB Glucose
-0.3
+0.1
+0.0
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.0
-0.0
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
+0.0
+0.2
-0.1
+0.0
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.4
+0.2
-0.4
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.0
-0.1
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.0
-0.0
-0.1
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.2
-0.2
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.2
-0.1
-0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.1
+0.1
-0.0
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.0
-0.1
+0.0
+0.9
remove
mRNA_2753
plot
remove
mRNA_2754
plot
remove
mRNA_2755
remove
mRNA_2756
plot
remove
mRNA_2757
plot