Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11122 and 11123 are separated by 268 nucleotides11123 and 11124 are separated by 345 nucleotides11124 and 11125 are separated by 1223 nucleotides11125 and 11126 are separated by 267 nucleotides mRNA_2754: 11122 - SUPERFAMILY--SSF50249, at 141,143 to 143,248 11122 mRNA_2755: 11123 - K20247 EGT2 hercynylcysteine sulfoxide lyase, at 143,517 to 145,999 11123 mRNA_2756: 11124 - KOG2450 Aldehyde dehydrogenase, at 146,345 to 148,269 11124 mRNA_2757: 11125 - Hypothetical Protein, at 149,493 to 150,603 11125 mRNA_2758: 11126 - Hypothetical Protein, at 150,871 to 152,585 11126
Group Condition mRNA_2754 mRNA_2755 mRNA_2756 mRNA_2757 mRNA_2758
11122 11123 11124 11125 11126
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 -0.1 -0.8 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 -0.1 -0.6 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.2 +0.2 -1.1 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 +0.0 -0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 +0.2 -0.9 -0.1
auxotrophy Dropout Complete +0.1 -0.3 -0.2 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.0 +0.1 -0.6 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.2 -0.4 +0.2 +0.0
growth on oleic acid YNB Oleic Acid +0.2 -0.1 +0.0 -0.5 -0.1
auxotrophy YNB Glucose +0.1 -0.1 -0.1 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 -0.1 +0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 -0.1 -0.0 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 -0.0 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0 -0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.2 -0.1 -0.3 +0.3
growth on oleic acid YNB Glucose +0.1 +0.0 -0.1 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 -0.1 -0.3 +0.2
growth on ypd YPD -0.4 -0.1 +0.2 -0.2 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 -0.0 +0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.2 +0.1 +0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 +0.0 +0.9 +0.2
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