Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11128 and 11129 are separated by 665 nucleotides11129 and 11130 are separated by 231 nucleotides11130 and 11131 are separated by 292 nucleotides11131 and 11132 are separated by 437 nucleotides mRNA_2760: 11128 - HMMPfam-Acyltransferase-PF01553,SMART-Phosphate acyltransferases-SM00563,SUPERFAMILY--SSF69593, at 153,952 to 156,416 11128 mRNA_2761: 11129 - K00031 IDH1, IDH2, icd isocitrate dehydrogenase, at 157,082 to 158,929 11129 mRNA_2762: 11130 - BLAST Protein pof8 [Termitomyces sp. J132], at 159,161 to 161,620 11130 mRNA_2763: 11131 - Hypothetical Protein, at 161,913 to 163,067 11131 mRNA_2764: 11132 - Hypothetical Protein, at 163,505 to 164,257 11132
Group Condition mRNA_2760 mRNA_2761 mRNA_2762 mRNA_2763 mRNA_2764
11128 11129 11130 11131 11132
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -1.8 +0.0 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 -1.8 +0.2 -0.3 -0.0
auxotrophy YNB Glucose +0.3 -1.7 -0.1 -0.4 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.6 -0.3 +0.0 -0.6
auxotrophy YNB Glucose 75mM Arginine +0.4 -0.8 -0.0 -0.5 -0.3
growth on oleic acid YNB Glucose +0.3 -1.4 +0.0 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.3 -1.2 -0.3 -0.4 +1.1
auxotrophy Dropout Complete -0.2 -0.5 +0.2 -0.3 +0.0
growth on ypd YPD -0.6 -0.1 -0.0 +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.9 +0.1 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.3 +0.3 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.3 -0.1 -1.0 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.9 +0.2 +0.4 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.3 +0.0 -0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.2 +0.2 -0.5 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.3 +0.2 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.8 -0.3 -0.8 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 +0.2 +0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.9 +0.1 +0.5 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.3 +0.1 +0.2 -0.3
growth on oleic acid YNB Oleic Acid +0.1 +0.3 -0.0 -0.2 +0.5
remove
mRNA_2760
plot
remove
mRNA_2761
plot
remove
mRNA_2762
remove
mRNA_2763
plot
remove
mRNA_2764
plot