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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11129 and 11130 are separated by 231 nucleotides
11130 and 11131 are separated by 292 nucleotides
11131 and 11132 are separated by 437 nucleotides
11132 and 11133 are separated by 269 nucleotides
mRNA_2761: 11129 - K00031 IDH1, IDH2, icd isocitrate dehydrogenase, at 157,082 to 158,929
11129
mRNA_2762: 11130 - BLAST Protein pof8 [Termitomyces sp. J132], at 159,161 to 161,620
11130
mRNA_2763: 11131 - Hypothetical Protein, at 161,913 to 163,067
11131
mRNA_2764: 11132 - Hypothetical Protein, at 163,505 to 164,257
11132
mRNA_2765: 11133 - Hypothetical Protein, at 164,527 to 165,110
11133
Group
Condition
mRNA
_2761
mRNA
_2762
mRNA
_2763
mRNA
_2764
mRNA
_2765
11129
11130
11131
11132
11133
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.3
+0.0
-0.6
-2.4
auxotrophy
YNB Glucose 75mM Methionine
-1.8
+0.2
-0.3
-0.0
-1.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.9
+0.2
+0.4
-0.0
-3.1
auxotrophy
Dropout Complete
-0.5
+0.2
-0.3
+0.0
-1.9
auxotrophy
YNB Glucose
-1.7
-0.1
-0.4
+0.3
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.8
-0.0
-0.5
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.8
+0.0
-0.1
-0.0
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.1
+0.2
-0.3
-1.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.1
-1.0
+0.6
-1.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.2
-0.1
-0.2
-1.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
+0.1
+0.5
+0.4
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
+0.1
-0.0
+0.4
-0.5
growth on ricinoleic acid
YNB Glucose
-1.2
-0.3
-0.4
+1.1
-0.2
growth on oleic acid
YNB Glucose
-1.4
+0.0
+0.1
-0.1
+0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.2
-0.5
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.3
+0.1
-0.1
-0.7
growth on ypd
YPD
-0.1
-0.0
+0.2
-0.0
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.0
-0.0
+0.0
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
-0.3
-0.8
+0.6
-0.7
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
+0.0
-0.2
-0.4
growth on oleic acid
YNB Oleic Acid
+0.3
-0.0
-0.2
+0.5
+0.5
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