Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11130 and 11131 are separated by 292 nucleotides
11131 and 11132 are separated by 437 nucleotides
11132 and 11133 are separated by 269 nucleotides
11133 and 11134 are separated by 250 nucleotides
mRNA_2762: 11130 - BLAST Protein pof8 [Termitomyces sp. J132], at 159,161 to 161,620
11130
mRNA_2763: 11131 - Hypothetical Protein, at 161,913 to 163,067
11131
mRNA_2764: 11132 - Hypothetical Protein, at 163,505 to 164,257
11132
mRNA_2765: 11133 - Hypothetical Protein, at 164,527 to 165,110
11133
mRNA_2766: 11134 - KOG2827 Uncharacterized conserved protein, at 165,361 to 166,420
11134
Group
Condition
mRNA
_2762
mRNA
_2763
mRNA
_2764
mRNA
_2765
mRNA
_2766
11130
11131
11132
11133
11134
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.0
-0.6
-2.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.4
-0.0
-3.1
N.D.
auxotrophy
Dropout Complete
+0.2
-0.3
+0.0
-1.9
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.3
-0.0
-1.7
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.2
-0.3
-1.7
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-1.0
+0.6
-1.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
-0.2
-1.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.5
-0.3
-0.5
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.8
+0.6
-0.7
N.D.
auxotrophy
YNB Glucose
-0.1
-0.4
+0.3
-0.4
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.5
+0.1
-0.4
N.D.
growth on ypd
YPD
-0.0
+0.2
-0.0
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.1
-0.1
-0.7
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.0
-0.2
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.0
+0.0
-0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.5
+0.4
-1.0
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.0
+0.4
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.1
-0.0
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
-0.4
+1.1
-0.2
N.D.
growth on oleic acid
YNB Glucose
+0.0
+0.1
-0.1
+0.5
N.D.
growth on oleic acid
YNB Oleic Acid
-0.0
-0.2
+0.5
+0.5
N.D.
remove
mRNA_2762
plot
remove
mRNA_2763
plot
remove
mRNA_2764
remove
mRNA_2765
plot
remove
mRNA_2766
plot