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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11132 and 11133 are separated by 269 nucleotides
11133 and 11134 are separated by 250 nucleotides
11134 and 11135 are separated by 130 nucleotides
11135 and 11136 are separated by 145 nucleotides
mRNA_2764: 11132 - Hypothetical Protein, at 163,505 to 164,257
11132
mRNA_2765: 11133 - Hypothetical Protein, at 164,527 to 165,110
11133
mRNA_2766: 11134 - KOG2827 Uncharacterized conserved protein, at 165,361 to 166,420
11134
mRNA_2767: 11135 - K10084 EDEM1 ER degradation enhancer, mannosidase alpha-like 1, at 166,551 to 170,333
11135
mRNA_2768: 11136 - K08681 pdxT, pdx2 5'-phosphate synthase pdxT subunit, at 170,479 to 171,341
11136
Group
Condition
mRNA
_2764
mRNA
_2765
mRNA
_2766
mRNA
_2767
mRNA
_2768
11132
11133
11134
11135
11136
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-3.1
N.D.
+0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-2.4
N.D.
+0.2
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-1.7
N.D.
-0.5
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-1.7
N.D.
-0.0
-0.5
auxotrophy
Dropout Complete
+0.0
-1.9
N.D.
+0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.5
N.D.
-0.3
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-1.3
N.D.
+0.1
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
-1.0
N.D.
-0.1
-0.4
growth on ypd
YPD
-0.0
-0.6
N.D.
-0.3
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.4
N.D.
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.7
N.D.
+0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.4
N.D.
-0.2
+0.2
auxotrophy
YNB Glucose
+0.3
-0.4
N.D.
+0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
-1.1
N.D.
+0.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.5
N.D.
+0.3
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.3
N.D.
+0.1
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
-0.7
N.D.
+0.4
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.2
N.D.
+0.2
+0.0
growth on oleic acid
YNB Glucose
-0.1
+0.5
N.D.
+0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+0.5
+0.5
N.D.
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
+1.1
-0.2
N.D.
+0.3
-0.0
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