Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11132 and 11133 are separated by 269 nucleotides11133 and 11134 are separated by 250 nucleotides11134 and 11135 are separated by 130 nucleotides11135 and 11136 are separated by 145 nucleotides mRNA_2764: 11132 - Hypothetical Protein, at 163,505 to 164,257 11132 mRNA_2765: 11133 - Hypothetical Protein, at 164,527 to 165,110 11133 mRNA_2766: 11134 - KOG2827 Uncharacterized conserved protein, at 165,361 to 166,420 11134 mRNA_2767: 11135 - K10084 EDEM1 ER degradation enhancer, mannosidase alpha-like 1, at 166,551 to 170,333 11135 mRNA_2768: 11136 - K08681 pdxT, pdx2 5'-phosphate synthase pdxT subunit, at 170,479 to 171,341 11136
Group Condition mRNA_2764 mRNA_2765 mRNA_2766 mRNA_2767 mRNA_2768
11132 11133 11134 11135 11136
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -3.1 N.D. +0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -2.4 N.D. +0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -1.7 N.D. -0.5 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -1.7 N.D. -0.0 -0.5
auxotrophy Dropout Complete +0.0 -1.9 N.D. +0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.5 N.D. -0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 -1.3 N.D. +0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -1.0 N.D. -0.1 -0.4
growth on ypd YPD -0.0 -0.6 N.D. -0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.4 N.D. -0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.7 N.D. +0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.4 N.D. -0.2 +0.2
auxotrophy YNB Glucose +0.3 -0.4 N.D. +0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -1.1 N.D. +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.5 N.D. +0.3 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.3 N.D. +0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.7 N.D. +0.4 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 N.D. +0.2 +0.0
growth on oleic acid YNB Glucose -0.1 +0.5 N.D. +0.0 -0.1
growth on oleic acid YNB Oleic Acid +0.5 +0.5 N.D. -0.0 -0.1
growth on ricinoleic acid YNB Glucose +1.1 -0.2 N.D. +0.3 -0.0
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