Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11133 and 11134 are separated by 250 nucleotides
11134 and 11135 are separated by 130 nucleotides
11135 and 11136 are separated by 145 nucleotides
11136 and 11137 are separated by 223 nucleotides
mRNA_2765: 11133 - Hypothetical Protein, at 164,527 to 165,110
11133
mRNA_2766: 11134 - KOG2827 Uncharacterized conserved protein, at 165,361 to 166,420
11134
mRNA_2767: 11135 - K10084 EDEM1 ER degradation enhancer, mannosidase alpha-like 1, at 166,551 to 170,333
11135
mRNA_2768: 11136 - K08681 pdxT, pdx2 5'-phosphate synthase pdxT subunit, at 170,479 to 171,341
11136
mRNA_2769: 11137 - K06215 pdxS, pdx1 pyridoxal 5'-phosphate synthase pdxS subunit, at 171,565 to 173,167
11137
Group
Condition
mRNA
_2765
mRNA
_2766
mRNA
_2767
mRNA
_2768
mRNA
_2769
11133
11134
11135
11136
11137
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-3.1
N.D.
+0.0
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-1.7
N.D.
-0.0
-0.5
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.7
N.D.
-0.5
+0.1
-0.3
auxotrophy
Dropout Complete
-1.9
N.D.
+0.0
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.4
N.D.
+0.2
+0.1
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.5
N.D.
-0.3
-0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
N.D.
-0.1
-0.4
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-1.3
N.D.
+0.1
+0.0
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.1
N.D.
+0.2
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.4
N.D.
-0.3
-0.2
+0.1
growth on ypd
YPD
-0.6
N.D.
-0.3
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
N.D.
+0.0
+0.1
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
N.D.
+0.4
-0.0
-0.3
auxotrophy
YNB Glucose
-0.4
N.D.
+0.0
-0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
N.D.
+0.3
-0.4
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
N.D.
-0.2
+0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
+0.3
-0.0
+0.1
growth on oleic acid
YNB Glucose
+0.5
N.D.
+0.0
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
N.D.
+0.1
+0.4
+0.0
growth on oleic acid
YNB Oleic Acid
+0.5
N.D.
-0.0
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
N.D.
+0.2
+0.0
+0.1
remove
mRNA_2765
plot
remove
mRNA_2766
plot
remove
mRNA_2767
remove
mRNA_2768
plot
remove
mRNA_2769
plot