Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11134 and 11135 are separated by 130 nucleotides11135 and 11136 are separated by 145 nucleotides11136 and 11137 are separated by 223 nucleotides11137 and 11138 are separated by 342 nucleotides mRNA_2766: 11134 - KOG2827 Uncharacterized conserved protein, at 165,361 to 166,420 11134 mRNA_2767: 11135 - K10084 EDEM1 ER degradation enhancer, mannosidase alpha-like 1, at 166,551 to 170,333 11135 mRNA_2768: 11136 - K08681 pdxT, pdx2 5'-phosphate synthase pdxT subunit, at 170,479 to 171,341 11136 mRNA_2769: 11137 - K06215 pdxS, pdx1 pyridoxal 5'-phosphate synthase pdxS subunit, at 171,565 to 173,167 11137 mRNA_2770: 11138 - KOG0400 40S ribosomal protein S13, at 173,510 to 175,017 11138
Group Condition mRNA_2766 mRNA_2767 mRNA_2768 mRNA_2769 mRNA_2770
11134 11135 11136 11137 11138
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 -0.4 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.0 -0.5 -0.2 +0.1
growth on oleic acid YNB Glucose N.D. +0.0 -0.1 -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.4 +0.2 -0.0
growth on oleic acid YNB Oleic Acid N.D. -0.0 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 +0.1 -0.3 +0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.2 +0.1 +0.2
auxotrophy Dropout Complete N.D. +0.0 -0.2 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 +0.2 -0.1 -0.1
auxotrophy YNB Glucose N.D. +0.0 -0.2 -0.0 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 -0.4 +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 -0.0 -0.3 +0.0
growth on ypd YPD N.D. -0.3 -0.0 +0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 +0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 +0.1 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +0.0 +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.0 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 -0.0 +0.1 +0.3
growth on ricinoleic acid YNB Glucose N.D. +0.3 -0.0 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.4 +0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 +0.1 +0.3 +0.1
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