Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11135 and 11136 are separated by 145 nucleotides11136 and 11137 are separated by 223 nucleotides11137 and 11138 are separated by 342 nucleotides11138 and 11139 are separated by 809 nucleotides mRNA_2767: 11135 - K10084 EDEM1 ER degradation enhancer, mannosidase alpha-like 1, at 166,551 to 170,333 11135 mRNA_2768: 11136 - K08681 pdxT, pdx2 5'-phosphate synthase pdxT subunit, at 170,479 to 171,341 11136 mRNA_2769: 11137 - K06215 pdxS, pdx1 pyridoxal 5'-phosphate synthase pdxS subunit, at 171,565 to 173,167 11137 mRNA_2770: 11138 - KOG0400 40S ribosomal protein S13, at 173,510 to 175,017 11138 mRNA_2771: 11139 - KOG4072 Signal peptidase complex, subunit SPC25, at 175,827 to 177,001 11139
Group Condition mRNA_2767 mRNA_2768 mRNA_2769 mRNA_2770 mRNA_2771
11135 11136 11137 11138 11139
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.4 +0.2 -0.0 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 +0.0 +0.2 -0.9
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.5 -0.2 +0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.4 -0.2 +0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.4 +0.1 -0.1 -0.2
growth on oleic acid YNB Glucose +0.0 -0.1 -0.2 -0.2 +0.4
auxotrophy YNB Glucose +0.0 -0.2 -0.0 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.0 -0.3 +0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.1 -0.3 +0.4 +0.3
auxotrophy Dropout Complete +0.0 -0.2 -0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.0 +0.1 +0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.2 -0.1 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 +0.1 +0.2 +0.5
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.1 -0.1 +0.7
growth on ricinoleic acid YNB Glucose +0.3 -0.0 +0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.0 +0.1 +0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 +0.0 +0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.1 -0.1 +0.1 +0.4
growth on ypd YPD -0.3 -0.0 +0.2 +0.2 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.4 +0.0 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.1 +0.3 +0.1 +0.3
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