Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11137 and 11138 are separated by 342 nucleotides
11138 and 11139 are separated by 809 nucleotides
11139 and 11140 are separated by 190 nucleotides
11140 and 11141 are separated by 521 nucleotides
mRNA_2769: 11137 - K06215 pdxS, pdx1 pyridoxal 5'-phosphate synthase pdxS subunit, at 171,565 to 173,167
11137
mRNA_2770: 11138 - KOG0400 40S ribosomal protein S13, at 173,510 to 175,017
11138
mRNA_2771: 11139 - KOG4072 Signal peptidase complex, subunit SPC25, at 175,827 to 177,001
11139
mRNA_2772: 11140 - SUPERFAMILY--SSF56112, at 177,192 to 178,295
11140
mRNA_2773: 11141 - K02953 RP-S13e, RPS13 small subunit ribosomal protein S13e, at 178,817 to 179,625
11141
Group
Condition
mRNA
_2769
mRNA
_2770
mRNA
_2771
mRNA
_2772
mRNA
_2773
11137
11138
11139
11140
11141
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.2
-0.9
-0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.0
-0.1
-0.0
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.1
-0.2
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.0
-0.6
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.0
-0.2
+0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
+0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.3
-0.0
-0.3
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.1
+0.4
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.1
+0.0
+0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.1
+0.3
-0.5
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
-0.0
-0.1
+0.2
N.D.
auxotrophy
Dropout Complete
-0.1
+0.1
+0.2
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.4
+0.3
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.1
+0.2
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
+0.7
+0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.2
+0.2
+0.1
N.D.
growth on oleic acid
YNB Glucose
-0.2
-0.2
+0.4
+0.5
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.2
+0.5
-0.3
N.D.
auxotrophy
YNB Glucose
-0.0
+0.0
+0.1
+0.5
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.1
+0.3
+0.4
N.D.
growth on ypd
YPD
+0.2
+0.2
+0.6
+0.2
N.D.
remove
mRNA_2769
plot
remove
mRNA_2770
plot
remove
mRNA_2771
remove
mRNA_2772
plot
remove
mRNA_2773
plot