Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11139 and 11140 are separated by 190 nucleotides11140 and 11141 are separated by 521 nucleotides11141 and 11142 are separated by 1049 nucleotides11142 and 11143 are separated by 369 nucleotides mRNA_2771: 11139 - KOG4072 Signal peptidase complex, subunit SPC25, at 175,827 to 177,001 11139 mRNA_2772: 11140 - SUPERFAMILY--SSF56112, at 177,192 to 178,295 11140 mRNA_2773: 11141 - K02953 RP-S13e, RPS13 small subunit ribosomal protein S13e, at 178,817 to 179,625 11141 mRNA_2774: 11142 - K02991 RP-S6e, RPS6 small subunit ribosomal protein S6e, at 180,675 to 181,907 11142 mRNA_2775: 11143 - KOG1646 40S ribosomal protein S6, at 182,277 to 183,930 11143
Group Condition mRNA_2771 mRNA_2772 mRNA_2773 mRNA_2774 mRNA_2775
11139 11140 11141 11142 11143
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 -0.2 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.0 N.D. N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.1 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.3 N.D. N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.0 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.0 N.D. N.D. -0.2
auxotrophy Dropout Complete +0.2 +0.1 N.D. N.D. -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.3 N.D. N.D. +0.0
growth on ricinoleic acid YNB Glucose -0.1 +0.2 N.D. N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.5 -0.3 N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 N.D. N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.2 N.D. N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.5 N.D. N.D. +0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.1 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.4 N.D. N.D. -0.2
auxotrophy YNB Glucose +0.1 +0.5 N.D. N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 N.D. N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.7 +0.1 N.D. N.D. -0.1
growth on oleic acid YNB Glucose +0.4 +0.5 N.D. N.D. -0.2
growth on ypd YPD +0.6 +0.2 N.D. N.D. +0.4
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