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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11153 and 11154 are separated by 280 nucleotides
11154 and 11155 are separated by 138 nucleotides
11155 and 11156 are separated by 2146 nucleotides
11156 and 11157 are separated by 66 nucleotides
mRNA_2785: 11153 - ProSiteProfiles-CRIB domain profile.-PS50108, at 208,531 to 209,463
11153
mRNA_2786: 11154 - Hypothetical Protein, at 209,744 to 210,942
11154
mRNA_2787: 11155 - KOG1848 Uncharacterized conserved protein, at 211,081 to 216,177
11155
mRNA_2788: 11156 - HMMPfam-Protein of unknown function (DUF1183)-PF06682, at 218,324 to 218,690
11156
mRNA_2789: 11157 - Interpro SOCE-associated regulatory factor of calcium homoeostasis, at 218,757 to 219,433
11157
Group
Condition
mRNA
_2785
mRNA
_2786
mRNA
_2787
mRNA
_2788
mRNA
_2789
11153
11154
11155
11156
11157
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.0
+0.2
N.D.
N.D.
growth on ypd
YPD
+0.0
-0.3
-0.1
N.D.
N.D.
auxotrophy
Dropout Complete
-0.2
-0.1
+0.4
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.2
+0.3
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.4
+0.0
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.3
+0.4
N.D.
N.D.
auxotrophy
YNB Glucose
+0.2
-0.3
+0.4
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
+0.0
N.D.
N.D.
growth on oleic acid
YNB Glucose
+0.0
-0.2
+0.5
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.1
+0.4
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.2
+0.7
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.4
+0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.6
+0.1
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.6
+0.1
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.4
+0.1
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
+0.3
-0.1
+0.5
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.8
+0.1
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.6
+0.2
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.4
-0.0
+0.6
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.1
+0.7
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+0.5
+0.3
N.D.
N.D.
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