Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11154 and 11155 are separated by 138 nucleotides
11155 and 11156 are separated by 2146 nucleotides
11156 and 11157 are separated by 66 nucleotides
11157 and 11158 are separated by 195 nucleotides
mRNA_2786: 11154 - Hypothetical Protein, at 209,744 to 210,942
11154
mRNA_2787: 11155 - KOG1848 Uncharacterized conserved protein, at 211,081 to 216,177
11155
mRNA_2788: 11156 - HMMPfam-Protein of unknown function (DUF1183)-PF06682, at 218,324 to 218,690
11156
mRNA_2789: 11157 - Interpro SOCE-associated regulatory factor of calcium homoeostasis, at 218,757 to 219,433
11157
mRNA_2790: 11158 - Hypothetical Protein, at 219,629 to 222,406
11158
Group
Condition
mRNA
_2786
mRNA
_2787
mRNA
_2788
mRNA
_2789
mRNA
_2790
11154
11155
11156
11157
11158
growth on ypd
YPD
-0.3
-0.1
N.D.
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.4
N.D.
N.D.
-0.1
auxotrophy
YNB Glucose
-0.3
+0.4
N.D.
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.4
N.D.
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.0
N.D.
N.D.
-0.1
auxotrophy
Dropout Complete
-0.1
+0.4
N.D.
N.D.
-0.0
growth on oleic acid
YNB Oleic Acid
-0.1
+0.5
N.D.
N.D.
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.3
N.D.
N.D.
+0.1
growth on oleic acid
YNB Glucose
-0.2
+0.5
N.D.
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.1
N.D.
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.2
N.D.
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
+0.2
N.D.
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
+0.1
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+0.3
N.D.
N.D.
-0.3
growth on ricinoleic acid
YNB Glucose
-0.0
+0.6
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
+0.1
N.D.
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.0
N.D.
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.7
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
+0.1
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.3
N.D.
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.7
N.D.
N.D.
+0.0
remove
mRNA_2786
plot
remove
mRNA_2787
plot
remove
mRNA_2788
remove
mRNA_2789
plot
remove
mRNA_2790
plot