Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11156 and 11157 are separated by 66 nucleotides11157 and 11158 are separated by 195 nucleotides11158 and 11159 are separated by 161 nucleotides11159 and 11160 are separated by 296 nucleotides mRNA_2788: 11156 - HMMPfam-Protein of unknown function (DUF1183)-PF06682, at 218,324 to 218,690 11156 mRNA_2789: 11157 - Interpro SOCE-associated regulatory factor of calcium homoeostasis, at 218,757 to 219,433 11157 mRNA_2790: 11158 - Hypothetical Protein, at 219,629 to 222,406 11158 mRNA_2791: 11159 - K05544 DUS3 tRNA-dihydrouridine synthase 3, at 222,568 to 225,746 11159 mRNA_2792: 11160 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 226,043 to 228,012 11160
Group Condition mRNA_2788 mRNA_2789 mRNA_2790 mRNA_2791 mRNA_2792
11156 11157 11158 11159 11160
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.3 -0.4 +0.0
auxotrophy YNB Glucose N.D. N.D. -0.1 -0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.2 -0.4 +0.0
auxotrophy Dropout Complete N.D. N.D. -0.0 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.3 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.1 -0.2 +0.0
growth on oleic acid YNB Glucose N.D. N.D. -0.1 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.4 -0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.1 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.0 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.2 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.2 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.1 +0.0 +0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.0 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.1 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.2 -0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.2 -0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.1 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.2 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.3 +0.2 +0.3
growth on ypd YPD N.D. N.D. -0.3 +0.5 +0.2
remove
mRNA_2788
plot
remove
mRNA_2789
plot
remove
mRNA_2790
remove
mRNA_2791
plot
remove
mRNA_2792
plot