Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11160 and 11161 are separated by 28 nucleotides11161 and 11162 are separated by 430 nucleotides11162 and 11163 are separated by 363 nucleotides11163 and 11164 are separated by 311 nucleotides mRNA_2792: 11160 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 226,043 to 228,012 11160 mRNA_2793: 11161 - KOG3834 Golgi reassembly stacking protein GRASP65, contains PDZ domain, at 228,041 to 229,604 11161 mRNA_2794: 11162 - BLAST protein FAM72A [Rattus norvegicus], at 230,035 to 232,978 11162 mRNA_2795: 11163 - SUPERFAMILY--SSF56112, at 233,342 to 236,388 11163 mRNA_2796: 11164 - K08286 E2.7.11.- protein-serine/threonine kinase, at 236,700 to 240,335 11164
Group Condition mRNA_2792 mRNA_2793 mRNA_2794 mRNA_2795 mRNA_2796
11160 11161 11162 11163 11164
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.3 +0.1 +0.2 -1.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.6 +0.1 -0.0 -2.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.1 +0.1 -0.2 -1.3
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 +0.0 -0.1 -0.7
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.2 +0.0 -0.7 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.4 +0.3 +0.1 -0.9
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.1 -0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.3 +0.1 -0.6 -0.1
auxotrophy Dropout Complete -0.1 +0.3 +0.1 -0.5 +0.1
auxotrophy YNB Glucose -0.1 +0.3 +0.3 -0.7 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 +0.2 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.3 +0.1 -0.2 +0.2
growth on ypd YPD +0.2 +0.0 +0.1 +0.0 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 -0.2 +0.3 +0.9
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.7 +0.1 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.3 -0.1 +0.2 +0.7
growth on oleic acid YNB Glucose +0.0 +0.4 -0.0 -0.1 +1.5
growth on oleic acid YNB Oleic Acid +0.0 +0.2 +0.1 -0.0 +2.7
growth on ricinoleic acid YNB Glucose +0.1 +0.7 +0.1 -0.5 +2.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.4 +0.2 -0.6 +4.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.5 +0.3 -0.2 +3.5
remove
mRNA_2792
plot
remove
mRNA_2793
plot
remove
mRNA_2794
remove
mRNA_2795
plot
remove
mRNA_2796
plot