Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11163 and 11164 are separated by 311 nucleotides
11164 and 11165 are separated by 241 nucleotides
11165 and 11166 are separated by 328 nucleotides
11166 and 11167 are separated by 238 nucleotides
mRNA_2795: 11163 - SUPERFAMILY--SSF56112, at 233,342 to 236,388
11163
mRNA_2796: 11164 - K08286 E2.7.11.- protein-serine/threonine kinase, at 236,700 to 240,335
11164
mRNA_2797: 11165 - HMMPfam-CBP4-PF07960, at 240,577 to 240,997
11165
mRNA_2798: 11166 - K03537 POP5 ribonuclease P/MRP protein subunit POP5, at 241,326 to 242,097
11166
mRNA_2799: 11167 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 242,336 to 245,006
11167
Group
Condition
mRNA
_2795
mRNA
_2796
mRNA
_2797
mRNA
_2798
mRNA
_2799
11163
11164
11165
11166
11167
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-1.5
-2.1
-0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.5
-1.8
-1.7
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-2.1
+0.7
-0.6
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.9
-1.1
-0.4
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.7
-0.3
-0.6
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-1.3
-0.5
+0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.1
-0.4
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.6
-0.1
-0.6
+1.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.2
-0.8
+0.5
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.7
-0.2
+0.3
+1.2
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.2
-0.4
+0.6
-0.1
auxotrophy
YNB Glucose
-0.7
+0.4
-0.1
+0.8
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.7
-0.2
+0.1
-0.2
auxotrophy
Dropout Complete
-0.5
+0.1
+0.4
+0.9
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.9
-0.9
+0.8
-0.1
growth on oleic acid
YNB Glucose
-0.1
+1.5
-0.1
-0.1
-0.2
growth on ypd
YPD
+0.0
+0.5
+0.4
+0.3
-0.2
growth on ricinoleic acid
YNB Glucose
-0.5
+2.8
-0.5
+0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
+4.1
-0.9
-0.2
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+3.5
-1.8
+0.5
+0.0
growth on oleic acid
YNB Oleic Acid
-0.0
+2.7
-0.6
-0.3
+0.4
remove
mRNA_2795
plot
remove
mRNA_2796
plot
remove
mRNA_2797
remove
mRNA_2798
plot
remove
mRNA_2799
plot