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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11165 and 11166 are separated by 328 nucleotides
11166 and 11167 are separated by 238 nucleotides
11167 and 11168 are separated by 479 nucleotides
11168 and 11169 are separated by 343 nucleotides
mRNA_2797: 11165 - HMMPfam-CBP4-PF07960, at 240,577 to 240,997
11165
mRNA_2798: 11166 - K03537 POP5 ribonuclease P/MRP protein subunit POP5, at 241,326 to 242,097
11166
mRNA_2799: 11167 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 242,336 to 245,006
11167
mRNA_2800: 11168 - SUPERFAMILY--SSF52047, at 245,486 to 250,213
11168
mRNA_2801: 11169 - Hypothetical Protein, at 250,557 to 251,555
11169
Group
Condition
mRNA
_2797
mRNA
_2798
mRNA
_2799
mRNA
_2800
mRNA
_2801
11165
11166
11167
11168
11169
facs on lipid accumulation
Sorted High BODIPY Gate
-1.8
-1.7
-0.1
+0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-2.1
-0.3
-0.4
+0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.9
-0.2
-0.3
-0.1
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.8
+0.5
+0.0
+0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
-0.4
+0.1
+0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.6
-0.1
+0.0
-0.2
growth on ricinoleic acid
YNB Glucose
-0.5
+0.0
-0.3
-0.0
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.1
-0.3
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
+0.5
+0.0
-0.0
-0.4
growth on oleic acid
YNB Oleic Acid
-0.6
-0.3
+0.4
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.1
-0.2
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.9
+0.8
-0.1
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
-0.6
-0.2
-0.0
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.2
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
+0.2
+0.1
+0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.4
+0.6
-0.1
+0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.6
+1.1
-0.3
+0.1
-0.2
auxotrophy
YNB Glucose
-0.1
+0.8
-0.1
+0.1
-0.4
growth on ypd
YPD
+0.4
+0.3
-0.2
-0.1
+0.2
auxotrophy
Dropout Complete
+0.4
+0.9
-0.0
+0.1
-0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+1.2
-0.4
+0.0
-0.2
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