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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11166 and 11167 are separated by 238 nucleotides
11167 and 11168 are separated by 479 nucleotides
11168 and 11169 are separated by 343 nucleotides
11169 and 11170 are separated by 21 nucleotides
mRNA_2798: 11166 - K03537 POP5 ribonuclease P/MRP protein subunit POP5, at 241,326 to 242,097
11166
mRNA_2799: 11167 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 242,336 to 245,006
11167
mRNA_2800: 11168 - SUPERFAMILY--SSF52047, at 245,486 to 250,213
11168
mRNA_2801: 11169 - Hypothetical Protein, at 250,557 to 251,555
11169
mRNA_2802: 11170 - K11309 RTT109, KAT11 regulator of Ty1 transposition protein 109, at 251,577 to 253,280
11170
Group
Condition
mRNA
_2798
mRNA
_2799
mRNA
_2800
mRNA
_2801
mRNA
_2802
11166
11167
11168
11169
11170
facs on lipid accumulation
Sorted High BODIPY Gate
-1.7
-0.1
+0.1
-0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.3
-0.1
-0.6
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.2
-0.0
-0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.6
-0.1
+0.0
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
+0.0
-0.3
-0.0
-0.4
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
+0.0
-0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.4
+0.2
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.2
+0.1
-0.3
N.D.
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.0
+0.0
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.1
+0.1
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
-0.3
+0.4
+0.0
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
+0.0
-0.0
-0.4
N.D.
growth on ypd
YPD
+0.3
-0.2
-0.1
+0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
+0.0
+0.1
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.1
+0.0
-0.1
N.D.
auxotrophy
YNB Glucose
+0.8
-0.1
+0.1
-0.4
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.6
-0.1
+0.0
-0.1
N.D.
auxotrophy
Dropout Complete
+0.9
-0.0
+0.1
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
-0.1
-0.1
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+1.1
-0.3
+0.1
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+1.2
-0.4
+0.0
-0.2
N.D.
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