Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11167 and 11168 are separated by 479 nucleotides11168 and 11169 are separated by 343 nucleotides11169 and 11170 are separated by 21 nucleotides11170 and 11171 are separated by 176 nucleotides mRNA_2799: 11167 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 242,336 to 245,006 11167 mRNA_2800: 11168 - SUPERFAMILY--SSF52047, at 245,486 to 250,213 11168 mRNA_2801: 11169 - Hypothetical Protein, at 250,557 to 251,555 11169 mRNA_2802: 11170 - K11309 RTT109, KAT11 regulator of Ty1 transposition protein 109, at 251,577 to 253,280 11170 mRNA_2803: 11171 - K01301 NAALAD N-acetylated-alpha-linked acidic dipeptidase, at 253,457 to 256,700 11171
Group Condition mRNA_2799 mRNA_2800 mRNA_2801 mRNA_2802 mRNA_2803
11167 11168 11169 11170 11171
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.1 -0.6 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.0 -0.4 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.2 +0.1 N.D. -0.8
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.0 -0.2 N.D. -0.2
auxotrophy YNB Glucose -0.1 +0.1 -0.4 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.1 -0.4 N.D. -0.3
growth on ypd YPD -0.2 -0.1 +0.2 N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 -0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.0 -0.4 N.D. -0.1
auxotrophy Dropout Complete -0.0 +0.1 -0.6 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 -0.3 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 -0.2 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.0 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.0 -0.1 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 -0.1 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 -0.2 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.0 -0.2 N.D. +0.2
growth on oleic acid YNB Glucose -0.2 -0.0 +0.0 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.1 -0.0 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.4 +0.0 -0.2 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 +0.0 N.D. +0.2
remove
mRNA_2799
plot
remove
mRNA_2800
plot
remove
mRNA_2801
remove
mRNA_2802
plot
remove
mRNA_2803
plot