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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11168 and 11169 are separated by 343 nucleotides
11169 and 11170 are separated by 21 nucleotides
11170 and 11171 are separated by 176 nucleotides
11171 and 11172 are separated by 735 nucleotides
mRNA_2800: 11168 - SUPERFAMILY--SSF52047, at 245,486 to 250,213
11168
mRNA_2801: 11169 - Hypothetical Protein, at 250,557 to 251,555
11169
mRNA_2802: 11170 - K11309 RTT109, KAT11 regulator of Ty1 transposition protein 109, at 251,577 to 253,280
11170
mRNA_2803: 11171 - K01301 NAALAD N-acetylated-alpha-linked acidic dipeptidase, at 253,457 to 256,700
11171
mRNA_2804: 11172 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 257,436 to 258,912
11172
Group
Condition
mRNA
_2800
mRNA
_2801
mRNA
_2802
mRNA
_2803
mRNA
_2804
11168
11169
11170
11171
11172
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
N.D.
+0.2
-2.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.4
N.D.
-0.3
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.6
N.D.
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.4
N.D.
-0.1
-0.2
auxotrophy
YNB Glucose
+0.1
-0.4
N.D.
-0.3
-0.0
growth on ypd
YPD
-0.1
+0.2
N.D.
-0.5
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.2
N.D.
-0.2
-0.2
auxotrophy
Dropout Complete
+0.1
-0.6
N.D.
+0.0
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.2
N.D.
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.1
N.D.
-0.3
+0.1
growth on oleic acid
YNB Oleic Acid
+0.0
-0.2
N.D.
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.1
N.D.
-0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.0
N.D.
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.3
N.D.
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.4
N.D.
-0.1
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.1
N.D.
-0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.1
N.D.
-0.8
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.0
N.D.
+0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.2
N.D.
+0.0
+0.2
growth on oleic acid
YNB Glucose
-0.0
+0.0
N.D.
-0.1
+0.3
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