Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11169 and 11170 are separated by 21 nucleotides11170 and 11171 are separated by 176 nucleotides11171 and 11172 are separated by 735 nucleotides11172 and 11173 are separated by 373 nucleotides mRNA_2801: 11169 - Hypothetical Protein, at 250,557 to 251,555 11169 mRNA_2802: 11170 - K11309 RTT109, KAT11 regulator of Ty1 transposition protein 109, at 251,577 to 253,280 11170 mRNA_2803: 11171 - K01301 NAALAD N-acetylated-alpha-linked acidic dipeptidase, at 253,457 to 256,700 11171 mRNA_2804: 11172 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 257,436 to 258,912 11172 mRNA_2805: 11173 - KOG0128 RNA-binding protein SART3 (RRM superfamily), at 259,286 to 263,641 11173
Group Condition mRNA_2801 mRNA_2802 mRNA_2803 mRNA_2804 mRNA_2805
11169 11170 11171 11172 11173
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. +0.2 -2.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. -0.3 -0.7 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 N.D. -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.4 N.D. -0.1 -0.2 N.D.
auxotrophy YNB Glucose -0.4 N.D. -0.3 -0.0 N.D.
auxotrophy Dropout Complete -0.6 N.D. +0.0 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. -0.2 -0.2 N.D.
growth on ypd YPD +0.2 N.D. -0.5 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.0 -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.2 N.D. +0.0 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.2 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. -0.1 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.8 +0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. +0.1 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. -0.1 +0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.1 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. +0.0 +0.2 N.D.
growth on oleic acid YNB Glucose +0.0 N.D. -0.1 +0.3 N.D.
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