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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11170 and 11171 are separated by 176 nucleotides
11171 and 11172 are separated by 735 nucleotides
11172 and 11173 are separated by 373 nucleotides
11173 and 11174 are separated by 168 nucleotides
mRNA_2802: 11170 - K11309 RTT109, KAT11 regulator of Ty1 transposition protein 109, at 251,577 to 253,280
11170
mRNA_2803: 11171 - K01301 NAALAD N-acetylated-alpha-linked acidic dipeptidase, at 253,457 to 256,700
11171
mRNA_2804: 11172 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 257,436 to 258,912
11172
mRNA_2805: 11173 - KOG0128 RNA-binding protein SART3 (RRM superfamily), at 259,286 to 263,641
11173
mRNA_2806: 11174 - Hypothetical Protein, at 263,810 to 265,112
11174
Group
Condition
mRNA
_2802
mRNA
_2803
mRNA
_2804
mRNA
_2805
mRNA
_2806
11170
11171
11172
11173
11174
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.2
-2.3
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.3
-0.7
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
-0.2
N.D.
-0.5
growth on ypd
YPD
N.D.
-0.5
-0.2
N.D.
-0.1
auxotrophy
YNB Glucose
N.D.
-0.3
-0.0
N.D.
-0.3
auxotrophy
Dropout Complete
N.D.
+0.0
-0.0
N.D.
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
-0.1
N.D.
-0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.0
-0.2
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
-0.5
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.2
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
+0.1
N.D.
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.8
+0.4
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
+0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
+0.1
N.D.
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
+0.1
N.D.
-0.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.0
-0.2
N.D.
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
-0.2
N.D.
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
+0.1
N.D.
+0.0
growth on oleic acid
YNB Glucose
N.D.
-0.1
+0.3
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
+0.2
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
+0.4
N.D.
+0.0
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