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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11174 and 11175 are separated by 2199 nucleotides
11175 and 11176 are separated by 334 nucleotides
11176 and 11177 are separated by 434 nucleotides
11177 and 11178 are separated by 185 nucleotides
mRNA_2806: 11174 - Hypothetical Protein, at 263,810 to 265,112
11174
mRNA_2807: 11175 - K11485 MTF2, PCL2 polycomb-like protein 2, at 267,312 to 269,571
11175
mRNA_2808: 11176 - KOG4539 Uncharacterized conserved protein, at 269,906 to 271,117
11176
mRNA_2809: 11177 - K08596 SENP7 sentrin-specific protease 7, at 271,552 to 278,521
11177
mRNA_2810: 11178 - K00026 MDH2 malate dehydrogenase, at 278,707 to 280,370
11178
Group
Condition
mRNA
_2806
mRNA
_2807
mRNA
_2808
mRNA
_2809
mRNA
_2810
11174
11175
11176
11177
11178
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.4
-0.6
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.5
+0.1
-0.3
N.D.
auxotrophy
YNB Glucose
-0.3
-0.1
+0.1
-0.3
N.D.
auxotrophy
Dropout Complete
-0.5
-0.1
+0.2
-0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.2
-0.6
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.4
+0.2
-0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-1.1
+0.6
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-1.6
+0.1
+0.7
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.0
+0.0
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.3
-0.4
+0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.3
+0.1
-0.4
N.D.
growth on ricinoleic acid
YNB Glucose
+0.0
-0.5
+0.4
+0.1
N.D.
growth on ypd
YPD
-0.1
-0.1
-0.1
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.4
+0.2
+0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.2
+0.4
-0.1
N.D.
growth on oleic acid
YNB Glucose
+0.1
+0.1
-0.3
+0.4
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.2
+0.4
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.2
+0.3
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
-0.0
+0.6
N.D.
growth on oleic acid
YNB Oleic Acid
+0.2
+0.8
-0.4
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.5
+0.0
+0.5
N.D.
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