Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11178 and 11179 are separated by 121 nucleotides11179 and 11180 are separated by 682 nucleotides11180 and 11181 are separated by 479 nucleotides11181 and 11182 are separated by 343 nucleotides mRNA_2810: 11178 - K00026 MDH2 malate dehydrogenase, at 278,707 to 280,370 11178 mRNA_2811: 11179 - Hypothetical Protein, at 280,492 to 281,442 11179 mRNA_2812: 11180 - Hypothetical Protein, at 282,125 to 283,432 11180 mRNA_2813: 11181 - SUPERFAMILY--SSF52047, at 283,912 to 285,183 11181 mRNA_2814: 11182 - Hypothetical Protein, at 285,527 to 286,439 11182
Group Condition mRNA_2810 mRNA_2811 mRNA_2812 mRNA_2813 mRNA_2814
11178 11179 11180 11181 11182
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.2 -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -1.3 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.6 -0.1 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.8 +0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.5 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 -0.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.4 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 +0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.0 -0.0 N.D. N.D.
growth on ypd YPD N.D. -0.0 +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.0 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 +0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.2 +0.1 N.D. N.D.
growth on oleic acid YNB Glucose N.D. +0.2 +0.3 N.D. N.D.
auxotrophy YNB Glucose N.D. +0.3 +0.4 N.D. N.D.
auxotrophy Dropout Complete N.D. +0.6 +0.2 N.D. N.D.
remove
mRNA_2810
plot
remove
mRNA_2811
plot
remove
mRNA_2812
remove
mRNA_2813
plot
remove
mRNA_2814
plot