Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11180 and 11181 are separated by 479 nucleotides11181 and 11182 are separated by 343 nucleotides11182 and 11183 are separated by 441 nucleotides11183 and 11184 are separated by 305 nucleotides mRNA_2812: 11180 - Hypothetical Protein, at 282,125 to 283,432 11180 mRNA_2813: 11181 - SUPERFAMILY--SSF52047, at 283,912 to 285,183 11181 mRNA_2814: 11182 - Hypothetical Protein, at 285,527 to 286,439 11182 mRNA_2815: 11183 - K09699 DBT, bkdB 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase), at 286,881 to 288,952 11183 mRNA_2816: 11184 - HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SMART-Domain in histone families 1 and 5-SM00526,SUPERFAMILY--SSF46785, at 289,258 to 289,809 11184
Group Condition mRNA_2812 mRNA_2813 mRNA_2814 mRNA_2815 mRNA_2816
11180 11181 11182 11183 11184
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. N.D. -3.6 +1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. N.D. -2.3 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. N.D. -1.8 +0.4
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. -1.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. N.D. -0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. N.D. -0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. N.D. -0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. N.D. -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. N.D. +0.1 -0.1
growth on ypd YPD +0.1 N.D. N.D. -0.4 +0.3
auxotrophy Dropout Complete +0.2 N.D. N.D. -0.0 -0.1
growth on ricinoleic acid YNB Glucose +0.0 N.D. N.D. -0.5 +0.6
auxotrophy YNB Glucose +0.4 N.D. N.D. -0.6 +0.3
growth on oleic acid YNB Glucose +0.3 N.D. N.D. -0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. N.D. +0.6 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. +0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. N.D. +0.2 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. +0.5 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. N.D. +0.8 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. N.D. +0.6 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. N.D. +0.8 +0.6
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