Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11181 and 11182 are separated by 343 nucleotides11182 and 11183 are separated by 441 nucleotides11183 and 11184 are separated by 305 nucleotides11184 and 11185 are separated by 293 nucleotides mRNA_2813: 11181 - SUPERFAMILY--SSF52047, at 283,912 to 285,183 11181 mRNA_2814: 11182 - Hypothetical Protein, at 285,527 to 286,439 11182 mRNA_2815: 11183 - K09699 DBT, bkdB 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase), at 286,881 to 288,952 11183 mRNA_2816: 11184 - HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SMART-Domain in histone families 1 and 5-SM00526,SUPERFAMILY--SSF46785, at 289,258 to 289,809 11184 mRNA_2817: 11185 - KOG2946 Uncharacterized conserved protein, at 290,103 to 291,394 11185
Group Condition mRNA_2813 mRNA_2814 mRNA_2815 mRNA_2816 mRNA_2817
11181 11182 11183 11184 11185
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -3.6 +1.0 -1.9
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -1.8 +0.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -2.3 +0.5 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. -1.3 -0.1 +0.7
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.1 -0.1 -0.6
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.3 -0.2 -0.1
auxotrophy Dropout Complete N.D. N.D. -0.0 -0.1 -0.4
auxotrophy YNB Glucose N.D. N.D. -0.6 +0.3 +0.0
growth on ypd YPD N.D. N.D. -0.4 +0.3 -0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.5 +0.6 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.2 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.4 +0.2 +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.5 +0.1 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.6 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.2 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.2 +0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.6 +0.3 -0.3
growth on oleic acid YNB Glucose N.D. N.D. -0.1 +0.1 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.5 +0.4 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.8 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.8 +0.6 +0.4
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