Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11186 and 11187 are separated by 223 nucleotides
11187 and 11188 are separated by 188 nucleotides
11188 and 11189 are separated by 1019 nucleotides
11189 and 11190 are separated by 343 nucleotides
mRNA_2818: 11186 - K02178 BUB1 checkpoint serine/threonine-protein kinase, at 292,080 to 296,876
11186
mRNA_2819: 11187 - HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785, at 297,100 to 297,771
11187
mRNA_2820: 11188 - HMMPfam-2-oxoacid dehydrogenases acyltransferase (catalytic domain)-PF00198,HMMPfam-Biotin-requiring enzyme-PF00364,HMMPfam-e3 binding domain-PF02817,SUPERFAMILY--SSF47005,SUPERFAMILY--SSF51230,SUPERFAMILY--SSF52777, at 297,960 to 299,453
11188
mRNA_2821: 11189 - BLAST DNA polymerase gamma [Kalmanozyma brasiliensis GH..., at 300,473 to 301,385
11189
mRNA_2822: 11190 - SUPERFAMILY--SSF52047, at 301,729 to 303,000
11190
Group
Condition
mRNA
_2818
mRNA
_2819
mRNA
_2820
mRNA
_2821
mRNA
_2822
11186
11187
11188
11189
11190
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.2
+0.4
+0.2
N.D.
-1.3
auxotrophy
YNB Glucose
-0.3
+0.2
-2.8
N.D.
+1.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.1
-0.7
N.D.
-0.8
auxotrophy
Dropout Complete
-0.3
-0.1
-2.3
N.D.
+1.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.7
-0.9
N.D.
-0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.6
+0.4
-2.2
N.D.
+1.1
growth on ricinoleic acid
YNB Glucose
-0.2
+0.5
-1.5
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.1
-0.6
N.D.
+0.0
growth on oleic acid
YNB Glucose
-0.4
+0.4
-0.1
N.D.
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-1.4
-0.0
+1.0
N.D.
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.8
-1.4
N.D.
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.2
-1.1
N.D.
+1.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.1
-1.0
N.D.
+0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
-0.2
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.5
-0.1
+1.8
N.D.
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
+0.8
-1.3
N.D.
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.1
-1.2
N.D.
+1.5
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.1
-1.5
N.D.
+2.3
growth on ypd
YPD
-0.3
+0.3
-0.9
N.D.
+1.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.5
+0.7
N.D.
-0.4
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
-0.0
N.D.
+1.3
remove
mRNA_2818
plot
remove
mRNA_2819
plot
remove
mRNA_2820
remove
mRNA_2821
plot
remove
mRNA_2822
plot