Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11187 and 11188 are separated by 188 nucleotides11188 and 11189 are separated by 1019 nucleotides11189 and 11190 are separated by 343 nucleotides11190 and 11191 are separated by 479 nucleotides mRNA_2819: 11187 - HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785, at 297,100 to 297,771 11187 mRNA_2820: 11188 - HMMPfam-2-oxoacid dehydrogenases acyltransferase (catalytic domain)-PF00198,HMMPfam-Biotin-requiring enzyme-PF00364,HMMPfam-e3 binding domain-PF02817,SUPERFAMILY--SSF47005,SUPERFAMILY--SSF51230,SUPERFAMILY--SSF52777, at 297,960 to 299,453 11188 mRNA_2821: 11189 - BLAST DNA polymerase gamma [Kalmanozyma brasiliensis GH..., at 300,473 to 301,385 11189 mRNA_2822: 11190 - SUPERFAMILY--SSF52047, at 301,729 to 303,000 11190 mRNA_2823: 11191 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 303,480 to 304,770 11191
Group Condition mRNA_2819 mRNA_2820 mRNA_2821 mRNA_2822 mRNA_2823
11187 11188 11189 11190 11191
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.7 N.D. -0.8 -0.1
auxotrophy YNB Glucose +0.2 -2.8 N.D. +1.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 -1.4 N.D. -0.4 -0.0
growth on ricinoleic acid YNB Glucose +0.5 -1.5 N.D. +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 -0.9 N.D. -0.6 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.6 N.D. +0.0 -0.2
auxotrophy Dropout Complete -0.1 -2.3 N.D. +1.4 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 -2.2 N.D. +1.1 +0.1
growth on oleic acid YNB Glucose +0.4 -0.1 N.D. -0.8 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.2 N.D. -1.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.2 N.D. -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 -1.0 N.D. +0.9 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 -1.3 N.D. +0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 -1.1 N.D. +1.0 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -1.2 N.D. +1.5 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.7 N.D. -0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -1.5 N.D. +2.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +1.0 N.D. -0.3 +0.3
growth on ypd YPD +0.3 -0.9 N.D. +1.9 +0.0
growth on oleic acid YNB Oleic Acid +0.2 -0.0 N.D. +1.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +1.8 N.D. +0.2 +0.2
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