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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11192 and 11193 are separated by 1124 nucleotides
11193 and 11194 are separated by 233 nucleotides
11194 and 11195 are separated by 65 nucleotides
11195 and 11196 are separated by 463 nucleotides
mRNA_2824: 11192 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 304,875 to 305,755
11192
mRNA_2825: 11193 - HMMPfam-F-box-like-PF12937, at 306,880 to 308,238
11193
mRNA_2826: 11194 - HMMPfam-Methyltransferase domain-PF13489,SUPERFAMILY--SSF53335, at 308,472 to 309,591
11194
mRNA_2827: 11195 - Hypothetical Protein, at 309,657 to 312,569
11195
mRNA_2828: 11196 - Hypothetical Protein, at 313,033 to 313,687
11196
Group
Condition
mRNA
_2824
mRNA
_2825
mRNA
_2826
mRNA
_2827
mRNA
_2828
11192
11193
11194
11195
11196
growth on oleic acid
YNB Oleic Acid
-0.4
-0.2
-0.0
N.D.
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
-0.0
-0.2
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
+0.9
-0.2
N.D.
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.6
+0.0
-0.2
N.D.
+0.6
growth on ypd
YPD
-0.2
+0.2
+0.2
N.D.
-0.3
auxotrophy
Dropout Complete
-0.3
+0.4
-0.2
N.D.
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
-0.1
-0.2
N.D.
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.0
+0.0
N.D.
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
-0.2
+0.3
N.D.
+0.8
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.0
+0.0
N.D.
+0.1
growth on oleic acid
YNB Glucose
-0.3
+0.1
-0.0
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.9
+0.1
N.D.
+1.0
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.2
-0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.1
+0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.1
-0.0
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.0
+0.1
N.D.
+0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.2
-0.2
N.D.
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.0
+0.0
N.D.
+1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.2
+0.4
N.D.
+0.4
auxotrophy
YNB Glucose
-0.0
+0.3
+0.1
N.D.
+0.4
growth on ricinoleic acid
YNB Glucose
-0.2
+0.1
+0.2
N.D.
+1.0
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