Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11197 and 11198 are separated by 234 nucleotides11198 and 11199 are separated by 314 nucleotides11199 and 11200 are separated by 403 nucleotides11200 and 11201 are separated by 629 nucleotides mRNA_2829: 11197 - Hypothetical Protein, at 313,817 to 315,093 11197 mRNA_2830: 11198 - BLAST 60S ribosomal protein L33-A [Wallemia ichthyophag..., at 315,328 to 317,739 11198 mRNA_2831: 11199 - HMMPfam-short chain dehydrogenase-PF00106,PRINTS-Glucose/ribitol dehydrogenase family signature-PR00081,SMART--SM00822,SUPERFAMILY--SSF51735, at 318,054 to 319,183 11199 mRNA_2832: 11200 - KOG1611 Predicted short chain-type dehydrogenase, at 319,587 to 320,810 11200 mRNA_2833: 11201 - KOG0254 Predicted transporter (major facilitator superfamily), at 321,440 to 324,159 11201
Group Condition mRNA_2829 mRNA_2830 mRNA_2831 mRNA_2832 mRNA_2833
11197 11198 11199 11200 11201
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.1 -0.9 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.2 +0.0 +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 +0.2 +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 +0.1 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.3 -0.0 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.4 -0.4 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.0 +0.6 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 +0.3 -0.3 +0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.1 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.0 +0.7 -0.1 -0.0
growth on oleic acid YNB Glucose +0.0 -0.1 +0.1 +0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.2 -0.3 +0.2 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.0 -0.4 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 +0.8 -0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 +0.3 +0.5 -0.3
auxotrophy YNB Glucose +0.1 +0.1 +0.4 +0.5 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.3 +0.2 +0.5 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.0 +0.6 +0.7 -0.4
growth on ypd YPD +0.5 +0.0 +0.1 -0.0 +0.2
growth on ricinoleic acid YNB Glucose +0.3 +0.4 +0.0 +0.5 -0.1
auxotrophy Dropout Complete +0.4 +0.2 +0.9 +0.6 -0.3
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