Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11198 and 11199 are separated by 314 nucleotides11199 and 11200 are separated by 403 nucleotides11200 and 11201 are separated by 629 nucleotides11201 and 11202 are separated by 300 nucleotides mRNA_2830: 11198 - BLAST 60S ribosomal protein L33-A [Wallemia ichthyophag..., at 315,328 to 317,739 11198 mRNA_2831: 11199 - HMMPfam-short chain dehydrogenase-PF00106,PRINTS-Glucose/ribitol dehydrogenase family signature-PR00081,SMART--SM00822,SUPERFAMILY--SSF51735, at 318,054 to 319,183 11199 mRNA_2832: 11200 - KOG1611 Predicted short chain-type dehydrogenase, at 319,587 to 320,810 11200 mRNA_2833: 11201 - KOG0254 Predicted transporter (major facilitator superfamily), at 321,440 to 324,159 11201 mRNA_2834: 11202 - K01001 ALG7 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, at 324,460 to 326,344 11202
Group Condition mRNA_2830 mRNA_2831 mRNA_2832 mRNA_2833 mRNA_2834
11198 11199 11200 11201 11202
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.9 +0.1 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 -0.1 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 +0.0 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.0 +0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.3 -0.3 +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.0 -0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.6 -0.3 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.4 +0.2 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.4 +0.4 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.1 +0.0 N.D.
growth on oleic acid YNB Glucose -0.1 +0.1 +0.3 +0.1 N.D.
growth on ypd YPD +0.0 +0.1 -0.0 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.3 +0.5 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.7 -0.1 -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.2 +0.5 -0.3 N.D.
auxotrophy YNB Glucose +0.1 +0.4 +0.5 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.8 -0.2 +0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.4 +0.0 +0.5 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.3 +0.2 +0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.6 +0.7 -0.4 N.D.
auxotrophy Dropout Complete +0.2 +0.9 +0.6 -0.3 N.D.
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