Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11200 and 11201 are separated by 629 nucleotides11201 and 11202 are separated by 300 nucleotides11202 and 11203 are separated by 158 nucleotides11203 and 11204 are separated by 324 nucleotides mRNA_2832: 11200 - KOG1611 Predicted short chain-type dehydrogenase, at 319,587 to 320,810 11200 mRNA_2833: 11201 - KOG0254 Predicted transporter (major facilitator superfamily), at 321,440 to 324,159 11201 mRNA_2834: 11202 - K01001 ALG7 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, at 324,460 to 326,344 11202 mRNA_2835: 11203 - K00022 HADH 3-hydroxyacyl-CoA dehydrogenase, at 326,503 to 328,205 11203 mRNA_2836: 11204 - HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221, at 328,530 to 330,386 11204
Group Condition mRNA_2832 mRNA_2833 mRNA_2834 mRNA_2835 mRNA_2836
11200 11201 11202 11203 11204
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.0 N.D. -1.9 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2 N.D. -0.8 -0.2
growth on oleic acid YNB Oleic Acid +0.1 +0.0 N.D. -1.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 N.D. -0.6 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.3 N.D. -0.6 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.3 N.D. -1.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.0 N.D. -0.6 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 N.D. -0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.2 N.D. +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 N.D. -0.4 +0.1
growth on oleic acid YNB Glucose +0.3 +0.1 N.D. -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.2 N.D. -0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.7 -0.4 N.D. -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 N.D. -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.3 N.D. +0.1 +0.1
auxotrophy Dropout Complete +0.6 -0.3 N.D. -0.1 +0.2
auxotrophy YNB Glucose +0.5 -0.4 N.D. +0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.2 N.D. -0.0 +0.3
growth on ricinoleic acid YNB Glucose +0.5 -0.1 N.D. -0.1 +0.3
growth on ypd YPD -0.0 +0.2 N.D. +0.2 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.6 N.D. -0.4 +0.4
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