Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11202 and 11203 are separated by 158 nucleotides11203 and 11204 are separated by 324 nucleotides11204 and 11205 are separated by 178 nucleotides11205 and 11206 are separated by 469 nucleotides mRNA_2834: 11202 - K01001 ALG7 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, at 324,460 to 326,344 11202 mRNA_2835: 11203 - K00022 HADH 3-hydroxyacyl-CoA dehydrogenase, at 326,503 to 328,205 11203 mRNA_2836: 11204 - HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221, at 328,530 to 330,386 11204 mRNA_2837: 11205 - KOG4100 Uncharacterized conserved protein, at 330,565 to 331,429 11205 mRNA_2838: 11206 - K02934 RP-L6e, RPL6 large subunit ribosomal protein L6e, at 331,899 to 332,766 11206
Group Condition mRNA_2834 mRNA_2835 mRNA_2836 mRNA_2837 mRNA_2838
11202 11203 11204 11205 11206
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.9 +0.1 -0.8 N.D.
growth on oleic acid YNB Oleic Acid N.D. -1.3 -0.1 -0.8 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -1.3 +0.3 -0.9 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.6 -0.1 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.6 -0.3 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.8 -0.2 -0.1 N.D.
growth on oleic acid YNB Glucose N.D. -0.3 -0.2 -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 +0.4 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.6 -0.2 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 -0.1 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 +0.1 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.1 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 -0.0 -0.2 N.D.
auxotrophy Dropout Complete N.D. -0.1 +0.2 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.1 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.0 +0.3 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.1 +0.1 N.D.
auxotrophy YNB Glucose N.D. +0.2 +0.0 +0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.1 +0.3 +0.2 N.D.
growth on ypd YPD N.D. +0.2 +0.4 +0.5 N.D.
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