Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11203 and 11204 are separated by 324 nucleotides
11204 and 11205 are separated by 178 nucleotides
11205 and 11206 are separated by 469 nucleotides
11206 and 11207 are separated by 978 nucleotides
mRNA_2835: 11203 - K00022 HADH 3-hydroxyacyl-CoA dehydrogenase, at 326,503 to 328,205
11203
mRNA_2836: 11204 - HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221, at 328,530 to 330,386
11204
mRNA_2837: 11205 - KOG4100 Uncharacterized conserved protein, at 330,565 to 331,429
11205
mRNA_2838: 11206 - K02934 RP-L6e, RPL6 large subunit ribosomal protein L6e, at 331,899 to 332,766
11206
mRNA_2839: 11207 - K01427 URE urease, at 333,745 to 337,824
11207
Group
Condition
mRNA
_2835
mRNA
_2836
mRNA
_2837
mRNA
_2838
mRNA
_2839
11203
11204
11205
11206
11207
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.9
+0.1
-0.8
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
-1.3
-0.1
-0.8
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.3
+0.3
-0.9
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
-0.1
-0.7
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.4
-0.7
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
-0.3
-0.2
N.D.
+0.2
growth on oleic acid
YNB Glucose
-0.3
-0.2
-0.4
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
-0.2
-0.1
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.2
+0.2
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.1
-0.1
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.1
+0.0
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
-0.2
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
-0.2
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.2
-0.2
N.D.
+0.1
auxotrophy
Dropout Complete
-0.1
+0.2
-0.3
N.D.
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
+0.0
N.D.
-0.0
growth on ricinoleic acid
YNB Glucose
-0.1
+0.3
+0.2
N.D.
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.3
-0.2
N.D.
+0.3
auxotrophy
YNB Glucose
+0.2
+0.0
+0.1
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
+0.1
N.D.
+0.1
growth on ypd
YPD
+0.2
+0.4
+0.5
N.D.
+0.2
remove
mRNA_2835
plot
remove
mRNA_2836
plot
remove
mRNA_2837
remove
mRNA_2838
plot
remove
mRNA_2839
plot