Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11204 and 11205 are separated by 178 nucleotides11205 and 11206 are separated by 469 nucleotides11206 and 11207 are separated by 978 nucleotides11207 and 11208 are separated by 301 nucleotides mRNA_2836: 11204 - HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221, at 328,530 to 330,386 11204 mRNA_2837: 11205 - KOG4100 Uncharacterized conserved protein, at 330,565 to 331,429 11205 mRNA_2838: 11206 - K02934 RP-L6e, RPL6 large subunit ribosomal protein L6e, at 331,899 to 332,766 11206 mRNA_2839: 11207 - K01427 URE urease, at 333,745 to 337,824 11207 mRNA_2840: 11208 - KOG4178 Soluble epoxide hydrolase, at 338,126 to 339,492 11208
Group Condition mRNA_2836 mRNA_2837 mRNA_2838 mRNA_2839 mRNA_2840
11204 11205 11206 11207 11208
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.7 N.D. -0.1 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 N.D. +0.2 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.9 N.D. -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 N.D. +0.1 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 N.D. +0.2 -0.8
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 N.D. -0.2 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.2 N.D. -0.1 -0.7
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 N.D. -0.0 -0.4
growth on oleic acid YNB Oleic Acid -0.1 -0.8 N.D. +0.1 +0.3
growth on oleic acid YNB Glucose -0.2 -0.4 N.D. -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 N.D. +0.1 -0.8
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.7 N.D. -0.5 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.2 N.D. +0.3 -0.8
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 N.D. -0.0 -0.3
auxotrophy Dropout Complete +0.2 -0.3 N.D. +0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.8 N.D. +0.0 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.0 N.D. -0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.2 N.D. +0.1 -0.0
auxotrophy YNB Glucose +0.0 +0.1 N.D. +0.1 +0.0
growth on ricinoleic acid YNB Glucose +0.3 +0.2 N.D. -0.2 +0.5
growth on ypd YPD +0.4 +0.5 N.D. +0.2 +0.1
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