Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11205 and 11206 are separated by 469 nucleotides11206 and 11207 are separated by 978 nucleotides11207 and 11208 are separated by 301 nucleotides11208 and 11209 are separated by 358 nucleotides mRNA_2837: 11205 - KOG4100 Uncharacterized conserved protein, at 330,565 to 331,429 11205 mRNA_2838: 11206 - K02934 RP-L6e, RPL6 large subunit ribosomal protein L6e, at 331,899 to 332,766 11206 mRNA_2839: 11207 - K01427 URE urease, at 333,745 to 337,824 11207 mRNA_2840: 11208 - KOG4178 Soluble epoxide hydrolase, at 338,126 to 339,492 11208 mRNA_2841: 11209 - KOG3290 Peroxisomal phytanoyl-CoA hydroxylase, at 339,851 to 340,983 11209
Group Condition mRNA_2837 mRNA_2838 mRNA_2839 mRNA_2840 mRNA_2841
11205 11206 11207 11208 11209
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 N.D. -0.1 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 N.D. -0.1 -0.6 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. -0.1 -0.7 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.7 N.D. -0.5 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.2 -0.8 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.2 -0.6 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.2 -0.8 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.1 -0.8 -0.1
auxotrophy Dropout Complete -0.3 N.D. +0.0 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.1 -0.8 +0.3
growth on oleic acid YNB Oleic Acid -0.8 N.D. +0.1 +0.3 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.0 -0.4 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 N.D. +0.0 +0.4 +0.0
growth on oleic acid YNB Glucose -0.4 N.D. -0.0 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. +0.3 -0.8 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. -0.0 -0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. +0.1 -0.0 +0.1
auxotrophy YNB Glucose +0.1 N.D. +0.1 +0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. -0.0 +0.0 -0.0
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.2 +0.5 -0.2
growth on ypd YPD +0.5 N.D. +0.2 +0.1 +0.4
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