Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11206 and 11207 are separated by 978 nucleotides
11207 and 11208 are separated by 301 nucleotides
11208 and 11209 are separated by 358 nucleotides
11209 and 11210 are separated by 765 nucleotides
mRNA_2838: 11206 - K02934 RP-L6e, RPL6 large subunit ribosomal protein L6e, at 331,899 to 332,766
11206
mRNA_2839: 11207 - K01427 URE urease, at 333,745 to 337,824
11207
mRNA_2840: 11208 - KOG4178 Soluble epoxide hydrolase, at 338,126 to 339,492
11208
mRNA_2841: 11209 - KOG3290 Peroxisomal phytanoyl-CoA hydroxylase, at 339,851 to 340,983
11209
mRNA_2842: 11210 - Hypothetical Protein, at 341,749 to 343,529
11210
Group
Condition
mRNA
_2838
mRNA
_2839
mRNA
_2840
mRNA
_2841
mRNA
_2842
11206
11207
11208
11209
11210
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.7
-0.5
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
-0.6
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.2
-0.8
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.5
+0.3
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
-0.8
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.1
-0.6
+0.0
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
-0.4
-0.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
-0.8
-0.1
+0.6
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
-0.8
+0.3
+0.4
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
-0.4
+0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
-0.3
+0.2
+0.1
auxotrophy
Dropout Complete
N.D.
+0.0
-0.2
-0.1
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.0
+0.0
-0.0
+0.2
growth on oleic acid
YNB Glucose
N.D.
-0.0
+0.2
-0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.3
-0.8
+0.5
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
+0.5
-0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
-0.0
+0.1
+0.3
auxotrophy
YNB Glucose
N.D.
+0.1
+0.0
-0.2
+0.6
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
+0.3
+0.0
+0.1
growth on ypd
YPD
N.D.
+0.2
+0.1
+0.4
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.0
+0.4
+0.0
+0.3
remove
mRNA_2838
plot
remove
mRNA_2839
plot
remove
mRNA_2840
remove
mRNA_2841
plot
remove
mRNA_2842
plot