Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11208 and 11209 are separated by 358 nucleotides
11209 and 11210 are separated by 765 nucleotides
11210 and 11211 are separated by 393 nucleotides
11211 and 11212 are separated by 436 nucleotides
mRNA_2840: 11208 - KOG4178 Soluble epoxide hydrolase, at 338,126 to 339,492
11208
mRNA_2841: 11209 - KOG3290 Peroxisomal phytanoyl-CoA hydroxylase, at 339,851 to 340,983
11209
mRNA_2842: 11210 - Hypothetical Protein, at 341,749 to 343,529
11210
mRNA_2843: 11211 - Hypothetical Protein, at 343,923 to 345,879
11211
mRNA_2844: 11212 - SUPERFAMILY--SSF54427, at 346,316 to 346,839
11212
Group
Condition
mRNA
_2840
mRNA
_2841
mRNA
_2842
mRNA
_2843
mRNA
_2844
11208
11209
11210
11211
11212
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.5
-0.5
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
-0.1
-0.1
+0.4
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
+0.0
-0.2
+0.3
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
-0.1
+0.1
+0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.2
+0.3
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.8
-0.1
+0.6
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
+0.0
+0.2
+0.4
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
+0.5
+0.2
+0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.2
+0.1
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.2
-0.3
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.8
+0.3
+0.4
+0.3
-0.0
growth on oleic acid
YNB Oleic Acid
+0.3
+0.0
+0.1
-0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.0
+0.2
+0.5
-0.5
auxotrophy
YNB Glucose
+0.0
-0.2
+0.6
+0.2
-0.4
growth on oleic acid
YNB Glucose
+0.2
-0.1
+0.1
+0.1
-0.1
growth on ypd
YPD
+0.1
+0.4
-0.2
-0.4
+0.3
auxotrophy
Dropout Complete
-0.2
-0.1
+0.4
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
+0.2
+0.2
-0.1
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.1
+0.3
+0.0
+0.1
growth on ricinoleic acid
YNB Glucose
+0.5
-0.2
+0.2
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.0
+0.3
-0.0
+0.7
remove
mRNA_2840
plot
remove
mRNA_2841
plot
remove
mRNA_2842
remove
mRNA_2843
plot
remove
mRNA_2844
plot