Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11209 and 11210 are separated by 765 nucleotides11210 and 11211 are separated by 393 nucleotides11211 and 11212 are separated by 436 nucleotides11212 and 11213 are separated by 192 nucleotides mRNA_2841: 11209 - KOG3290 Peroxisomal phytanoyl-CoA hydroxylase, at 339,851 to 340,983 11209 mRNA_2842: 11210 - Hypothetical Protein, at 341,749 to 343,529 11210 mRNA_2843: 11211 - Hypothetical Protein, at 343,923 to 345,879 11211 mRNA_2844: 11212 - SUPERFAMILY--SSF54427, at 346,316 to 346,839 11212 mRNA_2845: 11213 - K14767 UTP3, SAS10 U3 small nucleolar RNA-associated protein 3, at 347,032 to 349,782 11213
Group Condition mRNA_2841 mRNA_2842 mRNA_2843 mRNA_2844 mRNA_2845
11209 11210 11211 11212 11213
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.5 +0.3 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 +0.4 -0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.2 +0.3 -0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 +0.1 +0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.0 +0.1 -0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 +0.1 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.3 -0.1 -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.2 -0.1 +0.1 N.D.
growth on oleic acid YNB Glucose -0.1 +0.1 +0.1 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.2 +0.5 -0.5 N.D.
growth on ypd YPD +0.4 -0.2 -0.4 +0.3 N.D.
auxotrophy YNB Glucose -0.2 +0.6 +0.2 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.2 +0.4 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 +0.0 +0.1 N.D.
auxotrophy Dropout Complete -0.1 +0.4 +0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.6 +0.2 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.2 +0.3 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 -0.1 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.4 +0.3 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.3 -0.0 +0.7 N.D.
remove
mRNA_2841
plot
remove
mRNA_2842
plot
remove
mRNA_2843
remove
mRNA_2844
plot
remove
mRNA_2845
plot