Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11215 and 11216 are separated by 950 nucleotides11216 and 11217 are separated by 1380 nucleotides11217 and 11218 are separated by 300 nucleotides11218 and 11219 are separated by 401 nucleotides mRNA_2847: 11215 - ProSitePatterns-Zinc finger RING-type signature.-PS00518, at 351,577 to 353,493 11215 mRNA_2848: 11216 - HMMPfam-GMC oxidoreductase-PF00732,HMMPfam-GMC oxidoreductase-PF05199,PIRSF--PIRSF000137,ProSitePatterns-GMC oxidoreductases signature 2.-PS00624,SUPERFAMILY--SSF51905,SUPERFAMILY--SSF54373, at 354,444 to 356,897 11216 mRNA_2849: 11217 - K01611 speD, AMD1 S-adenosylmethionine decarboxylase, at 358,278 to 359,885 11217 mRNA_2850: 11218 - SUPERFAMILY--SSF52047, at 360,186 to 362,999 11218 mRNA_2851: 11219 - SUPERFAMILY--SSF52047, at 363,401 to 364,630 11219
Group Condition mRNA_2847 mRNA_2848 mRNA_2849 mRNA_2850 mRNA_2851
11215 11216 11217 11218 11219
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 -0.1 N.D. +0.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.1 +0.1 N.D. -0.0 -0.3
growth on ypd YPD -0.6 +0.3 N.D. -0.2 -0.2
auxotrophy Dropout Complete -0.7 -0.1 N.D. +0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.1 N.D. +0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 N.D. +0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 N.D. -0.1 +0.1
growth on oleic acid YNB Glucose -0.2 -0.0 N.D. -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.1 N.D. -0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 N.D. -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 N.D. +0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.2 N.D. +0.2 +0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1 N.D. +0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 N.D. +0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 N.D. -0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.0 N.D. +0.0 +0.1
auxotrophy YNB Glucose -0.2 +0.2 N.D. +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 N.D. -0.0 +0.3
growth on ricinoleic acid YNB Glucose +0.2 +0.0 N.D. +0.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.5 N.D. +0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.1 N.D. +0.0 +0.7
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