Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11217 and 11218 are separated by 300 nucleotides11218 and 11219 are separated by 401 nucleotides11219 and 11220 are separated by 270 nucleotides11220 and 11221 are separated by 356 nucleotides mRNA_2849: 11217 - K01611 speD, AMD1 S-adenosylmethionine decarboxylase, at 358,278 to 359,885 11217 mRNA_2850: 11218 - SUPERFAMILY--SSF52047, at 360,186 to 362,999 11218 mRNA_2851: 11219 - SUPERFAMILY--SSF52047, at 363,401 to 364,630 11219 mRNA_2852: 11220 - K01164 POP1 ribonuclease P/MRP protein subunit POP1, at 364,901 to 367,915 11220 mRNA_2853: 11221 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 368,272 to 370,458 11221
Group Condition mRNA_2849 mRNA_2850 mRNA_2851 mRNA_2852 mRNA_2853
11217 11218 11219 11220 11221
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 -0.3 N.D. -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 -0.5 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -0.1 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 -0.3 N.D. -0.4
auxotrophy Dropout Complete N.D. +0.3 -0.1 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 -0.3 N.D. +0.2
growth on oleic acid YNB Oleic Acid N.D. +0.1 +0.0 N.D. -0.2
growth on oleic acid YNB Glucose N.D. -0.0 -0.1 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.0 N.D. -0.1
auxotrophy YNB Glucose N.D. +0.1 +0.1 N.D. -0.2
growth on ypd YPD N.D. -0.2 -0.2 N.D. +0.5
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 -0.0 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 +0.1 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 +0.1 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.0 +0.3 N.D. +0.1
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.0 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 +0.2 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 +0.1 N.D. +0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 +0.7 N.D. -0.0
remove
mRNA_2849
plot
remove
mRNA_2850
plot
remove
mRNA_2851
remove
mRNA_2852
plot
remove
mRNA_2853
plot