Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11219 and 11220 are separated by 270 nucleotides11220 and 11221 are separated by 356 nucleotides11221 and 11222 are separated by 640 nucleotides11222 and 11223 are separated by 598 nucleotides mRNA_2851: 11219 - SUPERFAMILY--SSF52047, at 363,401 to 364,630 11219 mRNA_2852: 11220 - K01164 POP1 ribonuclease P/MRP protein subunit POP1, at 364,901 to 367,915 11220 mRNA_2853: 11221 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 368,272 to 370,458 11221 mRNA_2854: 11222 - KOG2084 Predicted histone tail methylase containing SET domain, at 371,099 to 373,142 11222 mRNA_2855: 11223 - K10747 LIG1 DNA ligase 1, at 373,741 to 377,451 11223
Group Condition mRNA_2851 mRNA_2852 mRNA_2853 mRNA_2854 mRNA_2855
11219 11220 11221 11222 11223
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. -0.5 -1.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. +0.2 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. -0.4 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.2 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. -0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. -0.2 +0.0 N.D.
auxotrophy Dropout Complete -0.1 N.D. -0.3 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. +0.2 -0.1 N.D.
growth on ypd YPD -0.2 N.D. +0.5 -0.5 N.D.
growth on oleic acid YNB Oleic Acid +0.0 N.D. -0.2 +0.1 N.D.
auxotrophy YNB Glucose +0.1 N.D. -0.2 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.2 -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.1 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. -0.1 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. +0.2 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. +0.1 +0.1 N.D.
growth on oleic acid YNB Glucose -0.1 N.D. +0.0 +0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. +0.1 +0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.5 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.7 N.D. -0.0 +0.2 N.D.
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