Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 11220 and 11221 are separated by 356 nucleotides11221 and 11222 are separated by 640 nucleotides11222 and 11223 are separated by 598 nucleotides11223 and 11224 are separated by 360 nucleotides mRNA_2852: 11220 - K01164 POP1 ribonuclease P/MRP protein subunit POP1, at 364,901 to 367,915 11220 mRNA_2853: 11221 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 368,272 to 370,458 11221 mRNA_2854: 11222 - KOG2084 Predicted histone tail methylase containing SET domain, at 371,099 to 373,142 11222 mRNA_2855: 11223 - K10747 LIG1 DNA ligase 1, at 373,741 to 377,451 11223 mRNA_2856: 11224 - K14288 XPOT exportin-T, at 377,812 to 382,012 11224
Group Condition mRNA_2852 mRNA_2853 mRNA_2854 mRNA_2855 mRNA_2856
11220 11221 11222 11223 11224
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 -1.4 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 +0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.2 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 +0.0 N.D. N.D.
auxotrophy Dropout Complete N.D. -0.3 +0.2 N.D. N.D.
auxotrophy YNB Glucose N.D. -0.2 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.2 N.D. N.D.
growth on ypd YPD N.D. +0.5 -0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.0 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 +0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.4 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.5 +0.1 N.D. N.D.
growth on oleic acid YNB Glucose N.D. +0.0 +0.5 N.D. N.D.
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