Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11222 and 11223 are separated by 598 nucleotides11223 and 11224 are separated by 360 nucleotides11224 and 11225 are separated by 490 nucleotides11225 and 11226 are separated by 246 nucleotides mRNA_2854: 11222 - KOG2084 Predicted histone tail methylase containing SET domain, at 371,099 to 373,142 11222 mRNA_2855: 11223 - K10747 LIG1 DNA ligase 1, at 373,741 to 377,451 11223 mRNA_2856: 11224 - K14288 XPOT exportin-T, at 377,812 to 382,012 11224 mRNA_2857: 11225 - K11247 SH3GL endophilin-A, at 382,503 to 383,665 11225 mRNA_2858: 11226 - HMMPfam-Translocon-associated protein (TRAP), alpha subunit-PF03896, at 383,912 to 385,065 11226
Group Condition mRNA_2854 mRNA_2855 mRNA_2856 mRNA_2857 mRNA_2858
11222 11223 11224 11225 11226
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 N.D. N.D. -1.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. N.D. -0.6 -0.3
growth on ypd YPD -0.5 N.D. N.D. +0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. N.D. -0.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. N.D. -0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. N.D. -0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. N.D. +0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. N.D. +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. N.D. +0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. N.D. +0.3 -0.2
growth on ricinoleic acid YNB Glucose +0.0 N.D. N.D. -0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. -0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. N.D. -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 N.D. N.D. +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. N.D. -0.1 +0.3
auxotrophy YNB Glucose +0.1 N.D. N.D. +0.4 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. N.D. +0.1 +0.4
auxotrophy Dropout Complete +0.2 N.D. N.D. +0.4 +0.2
growth on oleic acid YNB Glucose +0.5 N.D. N.D. +0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. N.D. +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. N.D. +0.7 +0.2
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