Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11227 and 11228 are separated by 332 nucleotides11228 and 11229 are separated by 316 nucleotides11229 and 11230 are separated by 642 nucleotides11230 and 11231 are separated by 212 nucleotides mRNA_2859: 11227 - Hypothetical Protein, at 385,402 to 386,720 11227 mRNA_2860: 11228 - K11811 arsH arsenical resistance protein ArsH, at 387,053 to 388,029 11228 mRNA_2861: 11229 - KOG4754 Predicted phosphoglycerate mutase, at 388,346 to 389,336 11229 mRNA_2862: 11230 - PRINTS-Proline rich extensin signature-PR01217, at 389,979 to 392,232 11230 mRNA_2863: 11231 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 392,445 to 393,702 11231
Group Condition mRNA_2859 mRNA_2860 mRNA_2861 mRNA_2862 mRNA_2863
11227 11228 11229 11230 11231
growth on oleic acid YNB Glucose +0.0 +0.1 N.D. -0.1 -1.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.4 N.D. -0.5 -0.8
auxotrophy YNB Glucose -0.2 -0.2 N.D. +0.0 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.6 N.D. -0.9 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.1 N.D. +0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.4 N.D. -0.5 -0.3
auxotrophy Dropout Complete -0.2 -0.1 N.D. -0.5 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.4 N.D. +0.2 +0.7
growth on oleic acid YNB Oleic Acid -0.1 +0.1 N.D. +0.1 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 N.D. +0.0 -0.2
growth on ypd YPD +0.1 +0.2 N.D. +0.1 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.2 N.D. -0.5 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.3 N.D. +0.0 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.6 N.D. -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.5 N.D. +0.3 -0.5
growth on ricinoleic acid YNB Glucose -0.1 +0.0 N.D. +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 N.D. +0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.0 N.D. +0.3 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.3 N.D. -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 N.D. +0.1 +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 N.D. +0.7 +0.6
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