Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11228 and 11229 are separated by 316 nucleotides11229 and 11230 are separated by 642 nucleotides11230 and 11231 are separated by 212 nucleotides11231 and 11232 are separated by 129 nucleotides mRNA_2860: 11228 - K11811 arsH arsenical resistance protein ArsH, at 387,053 to 388,029 11228 mRNA_2861: 11229 - KOG4754 Predicted phosphoglycerate mutase, at 388,346 to 389,336 11229 mRNA_2862: 11230 - PRINTS-Proline rich extensin signature-PR01217, at 389,979 to 392,232 11230 mRNA_2863: 11231 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 392,445 to 393,702 11231 mRNA_2864: 11232 - KOG2699 Predicted ubiquitin regulatory protein, at 393,832 to 395,067 11232
Group Condition mRNA_2860 mRNA_2861 mRNA_2862 mRNA_2863 mRNA_2864
11228 11229 11230 11231 11232
auxotrophy YNB Glucose -0.2 N.D. +0.0 -0.6 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 N.D. -0.5 -0.8 -0.5
growth on oleic acid YNB Glucose +0.1 N.D. -0.1 -1.3 -0.0
auxotrophy Dropout Complete -0.1 N.D. -0.5 +0.2 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 N.D. -0.9 -0.7 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. -0.5 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.1 -0.4 -0.2
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.1 -0.5 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. +0.0 +0.0 -0.4
growth on ypd YPD +0.2 N.D. +0.1 -0.7 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. +0.0 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -0.5 +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. -0.0 -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 N.D. +0.2 +0.7 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.2 +0.3 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. +0.1 +0.4 -0.4
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.2 +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.6 N.D. -0.3 -0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. +0.3 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.5 N.D. +0.3 -0.5 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.7 +0.6 +0.0
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