Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11229 and 11230 are separated by 642 nucleotides11230 and 11231 are separated by 212 nucleotides11231 and 11232 are separated by 129 nucleotides11232 and 11233 are separated by 298 nucleotides mRNA_2861: 11229 - KOG4754 Predicted phosphoglycerate mutase, at 388,346 to 389,336 11229 mRNA_2862: 11230 - PRINTS-Proline rich extensin signature-PR01217, at 389,979 to 392,232 11230 mRNA_2863: 11231 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 392,445 to 393,702 11231 mRNA_2864: 11232 - KOG2699 Predicted ubiquitin regulatory protein, at 393,832 to 395,067 11232 mRNA_2865: 11233 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 395,366 to 397,041 11233
Group Condition mRNA_2861 mRNA_2862 mRNA_2863 mRNA_2864 mRNA_2865
11229 11230 11231 11232 11233
growth on oleic acid YNB Glucose N.D. -0.1 -1.3 -0.0 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.5 -0.8 -0.5 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.9 -0.7 +0.3 -0.4
auxotrophy YNB Glucose N.D. +0.0 -0.6 -0.7 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 +0.2 -0.2 -1.0
auxotrophy Dropout Complete N.D. -0.5 +0.2 -0.4 -0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 -0.1 +0.0 -0.7
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 -0.2 -0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 +0.0 -0.4 -0.3
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.5 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.5 -0.3 -0.3 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.3 +0.0 -0.1 -0.8
growth on ypd YPD N.D. +0.1 -0.7 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 -0.3 -0.2 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 -0.4 -0.2 +0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 -0.5 +0.6 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.4 -0.4 +0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 +0.3 -0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.7 +0.6 +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 +0.7 +0.4 +0.6
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