Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11231 and 11232 are separated by 129 nucleotides11232 and 11233 are separated by 298 nucleotides11233 and 11234 are separated by 368 nucleotides11234 and 11235 are separated by 419 nucleotides mRNA_2863: 11231 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 392,445 to 393,702 11231 mRNA_2864: 11232 - KOG2699 Predicted ubiquitin regulatory protein, at 393,832 to 395,067 11232 mRNA_2865: 11233 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 395,366 to 397,041 11233 mRNA_2866: 11234 - ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 397,410 to 402,844 11234 mRNA_2867: 11235 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 403,264 to 404,865 11235
Group Condition mRNA_2863 mRNA_2864 mRNA_2865 mRNA_2866 mRNA_2867
11231 11232 11233 11234 11235
growth on oleic acid YNB Glucose -1.3 -0.0 -0.6 -0.1 +0.2
auxotrophy YNB Glucose -0.6 -0.7 -0.4 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 -0.5 +0.0 -0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.1 -0.8 -0.2 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -0.5 -0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 +0.3 -0.4 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.2 -1.0 -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.5 -0.3 +0.2 -0.2 -0.2
auxotrophy Dropout Complete +0.2 -0.4 -0.5 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.4 -0.3 +0.1 -0.2
growth on ypd YPD -0.7 -0.1 +0.3 -0.0 -0.1
growth on ricinoleic acid YNB Glucose +0.1 -0.2 -0.1 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.2 +0.5 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.0 -0.7 +0.2 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 +0.2 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.3 +0.6 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.6 +0.1 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.4 +0.4 -0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.6 +0.0 +0.1 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.4 +0.3 +0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 +0.4 +0.6 +0.0 +0.5
remove
mRNA_2863
plot
remove
mRNA_2864
plot
remove
mRNA_2865
remove
mRNA_2866
plot
remove
mRNA_2867
plot